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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10088468 chr8:24693844 A/G WRN chr8:30891317-31031285:+ -0.71 -6.91 2.07E-11 Box Plot
BLCA rs10090005 chr8:34729931 G/T CCDC25 chr8:27590828-27630170:- 0.65 6.14 2.05E-9 Box Plot
BLCA rs10090005 chr8:34729931 G/T KIAA1967 chr8:22462257-22477981:+ 0.66 6.34 6.57E-10 Box Plot
BLCA rs10090005 chr8:34729931 G/T PPP2R2A chr8:26149007-26230196:+ 0.62 6.36 5.63E-10 Box Plot
BLCA rs10093363 chr8:27164311 A/G BIN3 chr8:22477931-22526661:- 0.77 6.01 4.24E-9 Box Plot
BLCA rs10093363 chr8:27164311 A/G CNOT7 chr8:17082473-17104387:- 0.87 6.28 9.37E-10 Box Plot
BLCA rs10093363 chr8:27164311 A/G INTS9 chr8:28625178-28747759:- 0.89 6.18 1.62E-9 Box Plot
BLCA rs10093363 chr8:27164311 A/G KCTD9 chr8:25285363-25315992:- 0.68 6.05 3.36E-9 Box Plot
BLCA rs10093363 chr8:27164311 A/G KIAA1967 chr8:22462257-22477981:+ 0.88 6.29 8.93E-10 Box Plot
BLCA rs10093363 chr8:27164311 A/G R3HCC1 chr8:23127633-23153792:+ 0.81 6.38 5.13E-10 Box Plot
BLCA rs10093363 chr8:27164311 A/G XPO7 chr8:21777182-21864096:+ 0.84 6.05 3.51E-9 Box Plot
BLCA rs10094308 chr8:10263707 C/T AGPAT5 chr8:6565878-6617187:+ 0.67 6.77 4.8E-11 Box Plot
BLCA rs10094308 chr8:10263707 C/T ASAH1 chr8:17913501-17942507:- 0.44 6.08 2.83E-9 Box Plot
BLCA rs10094308 chr8:10263707 C/T BIN3 chr8:22477931-22526661:- 0.61 6.48 2.88E-10 Box Plot
BLCA rs10094308 chr8:10263707 C/T CCDC25 chr8:27590828-27630170:- 0.77 7.45 6.31E-13 Box Plot